dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04526
Location and strand information: 26189 - 28759 (-)
Family: CBM67|GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8045
Protein molecular weight: 95474.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04527
Location and strand information: 29449 - 32283 (+)
Family: null
Protein type: null
Protein description: Leucine--tRNA ligase

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04528
Location and strand information: 32387 - 33304 (+)
Family: 2.A.115.1.5
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04529
Location and strand information: 33349 - 33933 (+)
Family: null
Protein type: null
Protein description: dITP/XTP pyrophosphatase

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04530
Location and strand information: 34099 - 34941 (+)
Family: 1.A.30.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04531
Location and strand information: 35093 - 36031 (-)
Family: null
Protein type: null
Protein description: Quinolinate synthase A

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04532
Location and strand information: 36522 - 37049 (+)
Family: null
Protein type: null
Protein description: tRNA (guanosine(18)-2'-O)-methyltransferase

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04533
Location and strand information: 37454 - 39406 (-)
Family: GH27|CBM51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5867
Protein molecular weight: 72514.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04534
Location and strand information: 39617 - 41020 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04535
Location and strand information: 41221 - 43032 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.3926
Protein molecular weight: 69125.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04536
Location and strand information: 43068 - 46700 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04537
Location and strand information: 46712 - 49984 (+)
Family: GH2|CBM67
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.4802
Protein molecular weight: 123853.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04538
Location and strand information: 50200 - 50313 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04539
Location and strand information: 50654 - 52291 (-)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0218
Protein molecular weight: 62680.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04540
Location and strand information: 52296 - 54062 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04541
Location and strand information: 54065 - 55675 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04542
Location and strand information: 55694 - 58756 (-)
Family: 1.B.14.6.13
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000013_15|CGC2
Gene ID: MGYG000000013_04543
Location and strand information: 59194 - 61449 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7827
Protein molecular weight: 84536.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000013_04526	GH78_e47\|CBM67_e0\|3.2.1.40\|3.1.1.73	alpha-rhamnoside
MGYG000000013_04533	GH27_e8\|CBM51_e24
MGYG000000013_04535
MGYG000000013_04537	GH2_e2\|CBM67_e8\|3.2.1.23	beta-galactan
MGYG000000013_04539	GH78_e0\|3.2.1.40	alpha-rhamnoside
MGYG000000013_04543	GH92_e0\|3.2.1.114\|3.2.1.-	hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is alpha-rhamnoside

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000013_04526	hypothetical protein	CAZyme	26189	28759	-	CBM67\| GH78
MGYG000000013_04527	Leucine--tRNA ligase	null	29449	32283	+	tRNA-synt_1\| tRNA-synt_1_2\| Anticodon_1
MGYG000000013_04528	hypothetical protein	TC	32387	33304	+	2.A.115.1.5
MGYG000000013_04529	dITP/XTP pyrophosphatase	null	33349	33933	+	Ham1p_like
MGYG000000013_04530	hypothetical protein	TC	34099	34941	+	1.A.30.1.3
MGYG000000013_04531	Quinolinate synthase A	null	35093	36031	-	NadA
MGYG000000013_04532	tRNA (guanosine(18)-2'-O)-methyltransferase	null	36522	37049	+	SpoU_methylase
MGYG000000013_04533	hypothetical protein	CAZyme	37454	39406	-	GH27\| CBM51
MGYG000000013_04534	hypothetical protein	null	39617	41020	+	No domain
MGYG000000013_04535	hypothetical protein	CAZyme	41221	43032	+	GH105
MGYG000000013_04536	hypothetical protein	null	43068	46700	+	No domain
MGYG000000013_04537	Beta-galactosidase	CAZyme	46712	49984	+	GH2\| CBM67
MGYG000000013_04538	hypothetical protein	null	50200	50313	+	No domain
MGYG000000013_04539	hypothetical protein	CAZyme	50654	52291	-	GH78
MGYG000000013_04540	hypothetical protein	null	52296	54062	-	No domain
MGYG000000013_04541	hypothetical protein	null	54065	55675	-	SusD-like_3\| SusD_RagB
MGYG000000013_04542	TonB-dependent receptor SusC	TC	55694	58756	-	1.B.14.6.13
MGYG000000013_04543	hypothetical protein	CAZyme	59194	61449	+	GH92
Protein ID	Protein Name	Type	Start	End	Strand	Signature